Data Scientist Ii Salary in San Diego, CA

9 certified H-1B filings

According to TheRealSalaries.com analysis of official US Department of Labor filings (October 2024 - December 2025), the average H-1B salary for Data Scientist Ii in San Diego is $138,630 — 14% above the national median of $121,514.

Section 1
$138,630
Average
$83,177
Min Est.
$249,533
Max Est.
9
Filings

Top Employers for Data Scientist Ii in San Diego

CompanyAvg. SalaryFilings
Amazon.com Services LLC $155,168 5
Section 2

Data Scientist Ii in Other Cities

New York, NY
$158,241
72 filings
Seattle, WA
$145,028
71 filings
Bellevue, WA
$144,999
41 filings
San Francisco, CA
$162,889
21 filings
Boston, MA
$138,583
17 filings
Arlington, VA
$146,811
16 filings
Austin, TX
$143,278
14 filings
Palo Alto, CA
$163,662
13 filings

Other Roles in San Diego

Software Engineer ($131,320) Senior Software Engineer ($135,837) Staff Software Engineer ($171,398) Software Engineering Systems ($161,342) Software Development Engineer - Firmware ($164,449) Asics Engineer ($119,566) Senior Asics Engineer ($120,905) Software Development Engineer - Test ($159,760)
Section 3
Source: US Department of Labor LCA Disclosure Data. Updated: Q1 FY2025.