Scientist Ii Salary in San Diego, CA

6 certified H-1B filings

According to TheRealSalaries.com analysis of official US Department of Labor filings (October 2024 - December 2025), the average H-1B salary for Scientist Ii in San Diego is $105,018 — 14% below the national median of $121,514.

Section 1
$105,018
Average
$63,010
Min Est.
$189,032
Max Est.
6
Filings

Top Employers for Scientist Ii in San Diego

CompanyAvg. SalaryFilings
Kumquat Biosciences, Inc. $124,700 2
Section 2

Scientist Ii in Other Cities

Boston, MA
$108,661
16 filings
Madison, WI
$80,910
15 filings
Seattle, WA
$103,831
8 filings
San Francisco, CA
$137,937
6 filings

Other Roles in San Diego

Software Engineer ($131,320) Senior Software Engineer ($135,837) Staff Software Engineer ($171,398) Software Engineering Systems ($161,342) Software Development Engineer - Firmware ($164,449) Asics Engineer ($119,566) Senior Asics Engineer ($120,905) Software Development Engineer - Test ($159,760)
Section 3
Source: US Department of Labor LCA Disclosure Data. Updated: Q1 FY2025.